Montana Department of Environmental Quality About Us Permitting & Operator Assistance Public Participation

Nonpoint Source Program

Program Overview

Nonpoint source pollution typically comes from diffuse sources, such as grazing, timber harvest, abandoned mine lands, irrigation, recreation, and septic systems. It includes a wide range of pollutants and conditions, including nutrients (nitrogen and phosphorus), heavy metals, sediment, loss of riparian habitat, streamflow alteration, and temperature changes. Montana’s goal is to provide a clean and healthy environment by protecting and restoring water quality from the harmful effects of nonpoint source pollution. We believe this can best be achieved through voluntary implementation of land, soil, and water conservation practices.

Nonpoint Source Project Funding

DEQ provides approximately $1,000,000 each year to local watershed groups, conservation districts, educational institutions, and government entities to design and implement on-the-ground projects that reduce and prevent nonpoint source pollution. Increasingly, DEQ is focusing funding on projects that will restore natural processes (e.g., stream channel migration, floodplain connectivity, native riparian revegetation) and are likely to result in measurable improvements in water quality.

Funding Sources: United States Environmental Protection Agency (EPA) Section 319(h) of the Federal Clean Water Act. 

Total Funding Available: Approximately $1,000,000.

Funding Distribution

  • $500K to On-The-Ground projects located within a Focus Watershed. (Lower Gallatin is the current DEQ Nonpoint Source Focus watershed; Shields is an NRCS National Water Quality Initiative watershed)
  • $500K (plus any unallocated funds from the Focus Watersheds) to On-The-Ground projects elsewhere in Montana, and to Capacity Building / Education and Outreach projects. 

On-the-Ground Projects:
Recommended Range for Funding Requests: $10,000-$300,000

Capacity Building / Education and Outreach Projects:
Recommended Range for Funding Requests: $10,000-$30,000


Match Requirements

A 40 percent match (cost share) is required. The match must be from non-federal sources (state, local, private), and may include in-kind donations of time and resources contributed to completion of the project.

Use the following formula to calculate the minimum amount of non-federal match for your project: ((319 dollars requested)/.60) – (grant funding requested) = 40% required non-federal match. 


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Applicant Eligibility

Applicants must meet the following criteria:

  • Be a governmental entity or a nonprofit organization. A governmental entity is a local, state, or federal organization that has been established and authorized by law. Nonprofit organizations are identified as having a tax-exempt declaration of 501(c)(3) from the Internal Revenue Service.
  • Be registered with the Montana Secretary of State to do business in the state of Montana.
  • Have the necessary liability insurance, and be in compliance with the Workers Compensation Act.

Project Eligibility

Projects must meet the following minimum requirements: 

  • Address nonpoint source pollution.
  • Implement actions or practices identified in a DEQ-accepted Watershed Restoration Plan, an EPA-approved Tribal Nonpoint Source plan, or the current Montana Nonpoint Source Management Plan.
  • Be completable within three years. (Note: In some instances, sponsors may be encouraged to apply for funding for design and permitting, and then come back and apply for funding for actual construction in a subsequent year.)
  • On-The-Ground projects must address impairments identified on Montana’s 2020 List of Impaired Waters. In some instances, projects on streams that are not listed as impaired may be acceptable. These projects must reduce pollutant loading to an impaired, downstream receiving water OR protect existing uses from becoming impaired.

Additional minimum standards and requirements are included in the Call for Applications.

The following activities are NOT eligible for funding: 

  • Development of a Watershed Restoration Plan, exception made for Capacity Building projects.
  • Activities required as a condition of a point source (MPDES) discharge permit.
  • Projects whose primary purpose is to protect infrastructure from natural stream channel migration.
  • Use of non-native plant species in restoration projects.
  • Rip-rap, except in instances where it is necessary to protect a new bridge or culvert designed to restore aquatic organism passage.
  • Projects designed to address violations of state and federal law (e.g., projects that stem from a 310 violation or an Army Corps violation).
  • Projects that result in a net loss of wetlands or wetland function.
  • Statewide education and outreach campaigns.

Additional information is included in the Call for Applications.

All project applicants must thoroughly read the Call for Applications. To be eligible for funding, applicants must submit a draft application for DEQ's review and comment by 5pm on Friday, March 7, 2025. See timeline below for more details.


Funding Overview

Funding Sources:

United States Environmental Protection Agency (EPA) Section 319(h) of the Federal Clean Water Act. 

Total Funding Available: Approximately $1,000,000.

Funding Distribution: 

  • $500K to On-The-Ground projects located within the Lower Gallatin and Shields Focus Watersheds. (Lower Gallatin is a DEQ Nonpoint Source Focus watershed; Shields is an NRCS National Water Quality Initiative watershed)
  • $500K (plus any unallocated funds from the Focus Watersheds) to On-The-Ground projects elsewhere in Montana, and to Capacity Building / Education and Outreach projects. 

Project Types:

On-the-Ground Projects:
Recommended Range for Funding Requests: $10,000-$300,000
Application Form: On-the-Ground Projects

Capacity Building / Education and Outreach Projects:
Recommended Range for Funding Requests: $10,000-$30,000
Application Form: Capacity Building / Education and Outreach Projects


Match Requirements

A 40 percent match (cost share) is required. The match must be from non-federal sources (state, local, private), and may include in-kind donations of time and resources contributed to completion of the project.

Use the following formula to calculate the minimum amount of non-federal match for your project: ((319 dollars requested)/.60) – (grant funding requested) = 40% required non-federal match. 


Timeline: Two-Phase Solicitation Schedule

Date Event
***NEW!*** Draft Application Phase
To be eligible for funding, you must submit a draft application
for DEQ's review and comment by March 7, 2025.
Jan 17, 2025 Solicitation opens
Jan 17 - March 5, 2025 Applicants should work with Nonpoint Source and Wetlands (NPSW) program staff to ask questions, receive assistance and discuss draft applications. 
March 7, 2025, 5pm Complete, signed draft applications and all attachments submitted to Meagan Gilmore (Meagan.Gilmore@mt.gov) by 5pm. To be eligible for funding during the final application phase, you must submit a draft application during the draft application phase.
March 14, 2025 Draft applications and feedback posted to deq.mt.gov/water/programs/nonpoint  After this deadline, all questions must be posted to the Q&A Board in eMACS.
Final Application Phase
March 14, 2025 Final Solicitation opens. eMACs Q&A Board opens.
March 26 2025, 5pm eMACS Q&A Board closes. 
March 28, 2025, 5pm Final, complete, signed applications and all attachments, including required landowner letters of support, submitted to eMACS by 5pm. Unsigned applications will be rejected, as will any information submitted outside of eMACS.
April 17-18, 2025 Agency Review Panel meeting (see Appendix A for more details)
May 5, 2025 Applicants notified of funding decisions
May 5 - May 23, 2025 Contract development (DEQ and successful applicants)
October 2025 Funding becomes available

DEQ solicited applications for the next Focus Watershed.

A focus watershed is a HUC10 watershed area where the goal is to increase the capacity of local organizations, raise public awareness, and build momentum to generate significant and measurable progress toward reducing nonpoint source pollution.

  • Once selected, the focus watershed will be eligible for approximately $500k annually of Federal Clean Water Act §319 grant funding for three funding cycles (2026-2028) and additional technical assistance from DEQ staff.
  • Coalitions of local organizations are encouraged to self-nominate their HUC10 watershed if they feel their coalition could take full advantage of a focus watershed designation. 
  • Applications were accepted until Jan 3, 2025 at 5pm.

Applications were submitted through a Request For Information (RFI) process administered through the state online platform eMACS (electronic Montana Acquisition and Contracting System). Applicants need to be registered as a vendor in eMACS to respond to the RFI. 


Anticipated Schedule

Date Event
Oct 28, 2024 Focus Watershed Request for Information (RFI) period open
Nov 21, 2024 Optional Q&A conference on Microsoft Teams 11am-noon. 
Dec 18, 2024 eMACS Q&A Board question submission ends
Jan 3, 2025 Focus Watershed RFI period closes - Complete applications due to eMACS by 5pm

Jan 15, 2025
12:30pm

Interagency Review Panel for Focus Watershed selection
Zoom meeting
12:30 Training/discussion on scoring process
Panel discussion on each application:
1:20 Big Hole Watershed Committee - Wise River
2:00 Evergreen Water & Sewer District - Flathead River
2:20 Montana Freshwater Partners - Lower Shields
3:00 Final scores submitted

Jan 2025 Focus Watershed announced
Spring 2025 Planning year for Focus Watershed
Spring 2026
Spring 2027
Spring 2028
Focus Watershed funding available during annual 319 Nonpoint Source and Wetlands Call for Applications

Nonpoint source Contacts

Section Supervisor
Hannah Riedl (406) 444-0549

Water Quality Specialist
Mark Ockey (406) 444-5351

Water Quality Specialist
Meagan Gilmore (406) 755-8981

Water Quality Specialist
Ella Lunny (406) 444-6740

Senior Wetland Specialist
Stephen Carpenedo  (406) 444-3527

Water Quality Specialist
Torie Haraldson (406) 556-4511 

Education and Outreach Specialist
Tiffany Lyden (406) 444-3576 

Other Resources

DEQ provides limited funding for education and outreach through our E&O Mini-Grants Program, administered by Soil and Water Conservation. We are also often available to provide group presentations on a wide range of watershed health topics. DEQ provides significant support to watershed groups through partnerships and joint projects with the Montana Watershed Coordination Council, Montana Association of Conservation Districts, and state and federal agency partners.

Check out the education and outreach materials below that the 319 Program helped fund.
List of resources.
Topic Summary Project Sponsor
Beavers A video (5 minutes) about beaver mimicry for stream restoration Gallatin Watershed Council
Boating Lake-friendly fueling: a factsheet Flathead Lakers
Landownership Livingonthebank.org, an online resource for buying, selling, or improving land along lakes, streams, and rivers. Lewis and Clark Conservation District
Landownership A stewardship guide with basic information and best practices related to water, wildlife, forestry, grazing, wetlands, native and invasive plants, and more Blackfoot Challenge
Lawn maintenance Lake-friendly lawns: a factsheet Flathead Lakers
Livestock Management Avoiding algal issues in stockwater ponds: a magazine article MSU Extension
Livestock Management On-site Guide for Livestock Operators Soil and Water Conservation Districts of Montana
Pet Waste Poop Scoop Signs Gallatin Valley Land Trust
Riparian areas Riparian Awareness Campaign: a video (30 seconds) Missoula Valley Water Quality District
Riparian areas Channel migration zones and easements: The Shape of a River, short video (12 minutes) Montana Aquatic Resources Services
Septic Systems A factsheet Flathead Lakers
Septic Systems A checklist to maintain your septic system's record Flathead Lakers
Streams Montana Stream Permitting: A Guide for Conservation District Supervisors and Others Multiple partners
Watersheds An "augmented reality sandbox" for use as an education tool. Visit Lake County CD's website to learn more, and check out the Lake County Conservation District
Watersheds Audio and printed watershed stories, featuring individuals and organizations around the state. Montana Watershed Coordination
Winter maintenance Winter de-icing: a factsheet Flathead Lakers

Montana DEQ encourages the development of locally-led Watershed Restoration Plans (WRPs) as a means of charting a path to improved water quality. All 319-funded projects must implement practices identified in a DEQ-accepted Watershed Restoration Plan.

Watershed Restoration Plans
WRP Sponsor Status
Beaverhead Beaverhead Watershed Committee Accepted 2014, under revision, will include Red Rock
Bitterroot Bitter Root Water Forum Accepted 2020
Blackfoot River Blackfoot Challenge Accepted 2014
Central Clark Fork Tributaries   Under Development
Clarks Fork Yellowstone   Under Development
Clearwater Clearwater Resource Council Under Development
Deep Creek Broadwater Conservation District Accepted 2014
Flathead Lake Flathead Lakers Accepted 2014
Flathead Stillwater Flathead Conservation District Accepted 2017
Flint Creek Granite Headwaters Watershed Group Accepted 2014
Kootenai Basin Kootenai River Network Inc Accepted 2015
Lake Helena Lake Helena Watershed Group/Lewis & Clark Water Quality Protection District Accepted 2016
Little Blackfoot Trout Unlimited Accepted 2016
Lolo Creek Lolo Watershed Group Accepted 2013
Lower Clark Fork Lower Clark Fork Watershed Group Accepted 2019
Lower Gallatin Greater Gallatin Watershed Council Accepted 2014
Lower Jefferson River Trout Unlimited Under Development
Madison Watershed Madison Conservation District Accepted 2024
Miller Creek Missoula Valley Water Quality Protection District Accepted 2018
Middle and Lower Big Hole Watershed Big Hole Watershed Committee Accepted 2013, Under Revision
Middle Fork Judith Trout Unlimited Accepted 2022
Ninemile Creek Trout Unlimited Accepted 2013
Rock Creek Trout Unlimited Accepted 2018
Ruby Ruby Watershed Group Accepted 2015
Shields River Watershed Park Conservation District Accepted 2012
Smith River MT Fish, Wildlife, and Parks Accepted 2024
St. Regis Trout Unlimited Under Development
Sun River Sun River Watershed Group Accepted 2022
Swan Basin Swan Ecosystem Center Accepted 2012
Teton River Teton Watershed Group Accepted 2010
Thompson River Lower Clark Fork Watershed Group Accepted 2018
Upper & North Fork Big Hole Watershed Big Hole Watershed Committee Accepted 2012
Upper Clark Fork River Tributaries Watershed Restoration Coalition Accepted 2012
Upper Gallatin River Blue Water Task Force Accepted 2012
Upper Jefferson Jefferson River Watershed Council Under Development

Nine Minimum Elements

Each Watershed Restoration Plan must address nine minimum elements.

  • Identification of causes of impairment and sources of pollution.
  • An estimate of the pollutant load reductions needed to achieve water quality standard
  • A description of the nonpoint source management measures needed to achieve pollutant load reductions.
  • An estimate of the technical and financial assistance needed to implement the management measures.
  • An education and outreach component to encourage public participation in designing and implementing the management measures.
  • A reasonable schedule for implementing the management measures.
  • Milestones to gauge progress in implementing the management measures.
  • Criteria for determining to what extent management measures are reducing pollutant loads and improving water quality over time.
  • A monitoring plan for collecting the data necessary to evaluate improvements based on the criteria above.

Planning Tools and Guidance

The Environmental Protection Agency and other entities have developed tools to guide watershed restoration plan development.

Maps & Media

Ninemile Creek - 319 funded project
Nevada Creek - 319 funded project